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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs7828994 chr8:52442068 T/C 0.000228 472 15.15 17.1 13.55 KM Plot
THCA rs78303236 chr4:39454416 A/G 4.44E-15 489 15.9 16.38 6.1 KM Plot
THCA rs7833127 chr8:11579899 C/G 0.000143 485 16.63 16.75 15.65 KM Plot
THCA rs78346843 chr7:29820844 G/A 4.14E-5 489 16.02 15.17 12.83 KM Plot
THCA rs78350132 chr15:100200683 G/C 1.73E-14 477 15.67 16.23 12.97 KM Plot
THCA rs78355804 chr3:127634378 C/T 0 489 16.27 14.97 6.03 KM Plot
THCA rs78384860 chr10:105003019 G/T 1.42E-7 485 15.33 17.93 10.17 KM Plot
THCA rs7838873 chr8:52444260 T/G 0 489 16.38 14.55 7.3 KM Plot
THCA rs78398271 chr2:48051463 G/A 1.11E-7 487 15.33 17.93 8.27 KM Plot
THCA rs78399559 chr1:91735356 A/G 8.46E-6 484 15.77 17.03 17.77 KM Plot
THCA rs7840568 chr8:52438352 A/G 0.000244 482 15.07 17.23 18.3 KM Plot
THCA rs7841155 chr8:52432763 A/G 1.52E-6 487 14.93 18.03 18.13 KM Plot
THCA rs78420872 chr6:24464429 C/A 0 483 16.63 14.78 8.88 KM Plot
THCA rs78442776 chr1:16276458 C/T 0.000158 489 15.27 17.33 17.77 KM Plot
THCA rs78444404 chr10:90931116 GT/G 0.000311 482 15.33 17.85 14.47 KM Plot